5TPM
2.8 Angstrom Crystal Structure of the C-terminal Dimerization Domain of Transcriptional Regulator PdhR from Escherichia coli.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-14 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 64.397, 95.347, 70.001 |
Unit cell angles | 90.00, 114.09, 90.00 |
Refinement procedure
Resolution | 29.390 - 2.800 |
R-factor | 0.22377 |
Rwork | 0.222 |
R-free | 0.25674 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.469 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.850 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.094 | 0.750 |
Number of reflections | 19376 | |
<I/σ(I)> | 32.6 | 2.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 8.6 | 8.4 |
CC(1/2) | 0.913 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 295 | Protein: 15.0 mg/ml, 0.3M Sodium chloride, 0.01M HEPES pH 7.5; Screen: 0.2M NH4Formate, 20% (w/v) PEG3350;Cryo: paratone. |