5TP4
Crystal structure of a hydantoinase/carbamoylase family amidase from Burkholderia ambifaria
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-F |
| Synchrotron site | APS |
| Beamline | 21-ID-F |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-08-18 |
| Detector | RAYONIX MX-300 |
| Wavelength(s) | 0.97872 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 42.530, 136.960, 164.580 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 43.992 - 1.700 |
| R-factor | 0.1613 |
| Rwork | 0.161 |
| R-free | 0.19130 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5i4m |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.004 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.740 |
| High resolution limit [Å] | 1.700 | 7.600 | 1.700 |
| Rmerge | 0.074 | 0.021 | 0.543 |
| Rmeas | 0.082 | 0.023 | 0.593 |
| Total number of observations | 639016 | ||
| Number of reflections | 106677 | 1356 | 7742 |
| <I/σ(I)> | 17.87 | 46.81 | 3.68 |
| Completeness [%] | 99.8 | 98.5 | 99.9 |
| CC(1/2) | 0.999 | 1.000 | 0.885 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 290 | Rigaku Reagents Morpheus screen G2: 10% PEG8000, 20% ethylene glycol, 0.1 M MES/Imidazole pH 6.5, 0.02M sodium formate, 0.02M ammonium acetate, 0.02M trisodium citrate, 0.02M sodium potassium L-tartrate, 0.02M sodium oxamate; BuamA.12245.a.B1.PS37939 at 12.3 mg/ml, tray 274677 g2, puck icb9-10 |






