5TOG
Room temperature structure of ubiquitin variant u7ub25.2540
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 273 |
Detector technology | CCD |
Collection date | 2014-12-04 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.954 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 43.920, 43.920, 55.440 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.036 - 1.080 |
R-factor | 0.1042 |
Rwork | 0.103 |
R-free | 0.12110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1uqb |
RMSD bond length | 0.009 |
RMSD bond angle | 1.049 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | PHENIX (1.11_2556) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.040 | 38.040 | 1.110 |
High resolution limit [Å] | 1.080 | 4.830 | 1.080 |
Rmerge | 0.047 | 0.026 | 0.491 |
Number of reflections | 27011 | ||
<I/σ(I)> | 28.21 | 71.29 | 4.22 |
Completeness [%] | 99.7 | 95.5 | 96.8 |
Redundancy | 11.5 | ||
CC(1/2) | 1.000 | 0.999 | 0.909 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1ul protein solution at 10 mg/ml (20 mM Tris pH 8.0, 150 mM NaCl), 1ul crystallization solution (0.1 M citric acid pH 4.2, 2.2 M ammonium sulfate) |