5TKA
Structure of the HD-domain phosphohydrolase OxsA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-06-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | H 3 2 |
Unit cell lengths | 143.031, 143.031, 53.786 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.953 - 2.048 |
R-factor | 0.2087 |
Rwork | 0.206 |
R-free | 0.25390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2par |
RMSD bond length | 0.004 |
RMSD bond angle | 0.428 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.953 | 2.120 |
High resolution limit [Å] | 2.048 | 2.048 |
Rmerge | 0.055 | 0.610 |
Number of reflections | 13290 | |
<I/σ(I)> | 40 | 1.9 |
Completeness [%] | 99.7 | 97 |
Redundancy | 8.9 | 4.7 |
CC(1/2) | 0.724 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 0.1 M TRIS hydrochloride (pH 8.5), 0.2 M magnesium chloride hexahydrate, 15% w/v PEG 4000 |