5TK9
Structure of the HD-domain phosphohydrolase OxsA with Oxetanocin-A bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-31 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | H 3 2 |
Unit cell lengths | 143.031, 143.031, 53.786 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.000 - 1.843 |
R-factor | 0.1821 |
Rwork | 0.180 |
R-free | 0.22300 |
RMSD bond length | 0.010 |
RMSD bond angle | 0.840 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.000 | 1.920 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.077 | 0.930 |
Number of reflections | 18194 | |
<I/σ(I)> | 37.9 | 4.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.5 | 12.1 |
CC(1/2) | 0.922 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 0.1 M TRIS hydrochloride (pH 8.5), 0.2 M magnesium chloride hexahydrate, 15% w/v PEG monomethyl ether 2000 Protein solution:50 mM HEPES (pH 8.0), 100 mM NaCl, and 5% v/v glycerol, and 5 mM OXT |