5TK8
Structure of the HD-domain phosphohydrolase OxsA with Oxetanocin-A monophosphate bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | H 3 2 |
Unit cell lengths | 143.031, 143.031, 53.786 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.289 - 1.640 |
R-factor | 0.1806 |
Rwork | 0.179 |
R-free | 0.20400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5tk9 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.281 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.290 | 1.700 |
High resolution limit [Å] | 1.640 | 1.640 |
Rmerge | 0.045 | 0.841 |
Number of reflections | 25785 | |
<I/σ(I)> | 55.8 | 3.1 |
Completeness [%] | 99.7 | 99.5 |
Redundancy | 17.3 | 13.9 |
CC(1/2) | 0.886 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 0.1 M TRIS hydrochloride (pH 8.5), 0.2 M magnesium chloride hexahydrate, 30% w/v PEG 400 Protein solution contained: 50 mM HEPES (pH 8.0), 100 mM NaCl, and 5% v/v glycerol, and 5 mM OXT-P |