5THX
Crystal Structure of a ferredoxin NADP+ reductase from Neisseria gonorrhoeae with bound NADP and FAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-08-04 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 60.010, 60.010, 158.270 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.396 - 1.550 |
R-factor | 0.16 |
Rwork | 0.159 |
R-free | 0.18820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3crz |
RMSD bond length | 0.005 |
RMSD bond angle | 0.909 |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.590 |
High resolution limit [Å] | 1.550 | 6.930 | 1.550 |
Rmerge | 0.059 | 0.038 | 0.497 |
Number of reflections | 43054 | ||
<I/σ(I)> | 21.5 | 40.95 | 3.99 |
Completeness [%] | 99.9 | 97.2 | 100 |
Redundancy | 9.53 | ||
CC(1/2) | 0.999 | 0.998 | 0.950 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 290 | Morpheus (274695 A1): 10% w/v PEG 20 000, 20% v/v PEG MME 550, 0.3 M MgCl2, 0.3 M CaCl, 0.1 M MES/Imidazole pH 6.5 Direct cryo; Protein Concentration: 20.5 mg/mL; puck id: ifb3-8 |