Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5THA

Gemin5 WD40 repeats in complex with a guanosyl moiety

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2012-01-09
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths58.198, 125.253, 60.889
Unit cell angles90.00, 117.10, 90.00
Refinement procedure
Resolution32.510 - 1.800
R-factor0.1687
Rwork0.167
R-free0.20040
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.015
RMSD bond angle1.491
Data reduction softwareXDS
Data scaling softwareAimless (0.5.27)
Refinement softwareREFMAC (5.8.0155)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]32.51032.5101.840
High resolution limit [Å]1.8009.0001.800
Rmerge0.0530.0160.596
Rmeas0.0620.0190.696
Rpim0.0320.0100.358
Total number of observations260153211914208
Number of reflections69342
<I/σ(I)>17.9642.2
Completeness [%]96.897.591.5
Redundancy3.83.63.6
CC(1/2)0.9990.9990.784
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.1 M Na-Citrate, pH 5.5, 0.2 M Ammonium Acetate, and 18% PEG4K with 1 mM GpppG

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon