5T57
Crystal Structure of a Semialdehyde dehydrogenase NAD-binding Protein from Cupriavidus necator in Complex with Calcium and NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-17 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97931 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 87.903, 71.140, 47.649 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.956 - 1.650 |
R-factor | 0.1742 |
Rwork | 0.173 |
R-free | 0.20310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3c24 |
RMSD bond length | 0.021 |
RMSD bond angle | 1.956 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.22) |
Phasing software | PHASER (2.5.5) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.956 | 19.956 | 1.730 |
High resolution limit [Å] | 1.646 | 5.200 | 1.650 |
Rmerge | 0.033 | 0.919 | |
Number of reflections | 36952 | ||
<I/σ(I)> | 8.7 | 18.8 | 0.8 |
Completeness [%] | 99.9 | 96.2 | 100 |
Redundancy | 6.9 | 6.3 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M CaCl2, 20 (w/v) PEB-3350, 5 mM Mg, 5 mM NAD+ |