5T3W
Marburg virus VP30 bound to nucleoprotein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-12 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.750200 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 106.143, 106.143, 375.573 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 125.190 - 3.250 |
R-factor | 0.21401 |
Rwork | 0.213 |
R-free | 0.24082 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dvw |
RMSD bond length | 0.007 |
RMSD bond angle | 1.142 |
Data reduction software | XDS |
Data scaling software | XDS (Oct 15, 2015) |
Phasing software | PHASER (2.6.1) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 125.191 | 3.380 |
High resolution limit [Å] | 3.250 | 3.250 |
Rmerge | 0.110 | 2.960 |
Number of reflections | 39861 | |
<I/σ(I)> | 15.9 | 1.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 19.1 | 19.5 |
CC(1/2) | 1.000 | 0.610 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 298 | 20% isopropanol, 18% PEG 4000, 0.1M sodium citrate pH 5.6 using 0.2 uL 24.7 mg/mL protein mixed with 0.2 uL mother liquor |