5SY4
Atomic resolution structure of reduced E. coli YajL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.73 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.875, 78.313, 99.434 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.520 - 0.980 |
R-factor | 0.11427 |
Rwork | 0.114 |
R-free | 0.12660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ab0 |
RMSD bond length | 0.018 |
RMSD bond angle | 1.937 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.000 | 1.000 |
High resolution limit [Å] | 0.980 | 0.980 |
Rmerge | 0.085 | 2.393 |
Number of reflections | 191363 | |
<I/σ(I)> | 15.9 | 1.1 |
Completeness [%] | 97.6 | 96 |
Redundancy | 10.2 | 9.5 |
CC(1/2) | 1.000 | 0.479 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | polyethylene glycol 4000, Tris HCl, magnesium chloride |