5SSY
Crystal Structure of human formylglycine generating enzyme
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-19 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000000 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 43.475, 61.731, 109.719 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.860 - 1.290 |
R-factor | 0.2129 |
Rwork | 0.212 |
R-free | 0.23710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.860 | 54.860 | 1.230 |
High resolution limit [Å] | 1.200 | 5.360 | 1.200 |
Rmerge | 0.089 | 0.036 | 1.266 |
Rmeas | 0.098 | 0.039 | 1.661 |
Total number of observations | 458831 | ||
Number of reflections | 87450 | 1195 | 4075 |
<I/σ(I)> | 9.13 | 35.96 | 0.53 |
Completeness [%] | 93.8 | 99.6 | 60 |
Redundancy | 5.247 | 6.278 | 1.88 |
CC(1/2) | 0.998 | 0.998 | 0.539 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 9.6 mg/mL protein in 20mM Tris/HCl pH8.0 mixed 1:1 with reservoir 0.1M Tris/HCl pH 8.5, 20-25% PEG4000, 0.2-0.3M CaCl2 |