5SRV

PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with Z5198562533 - (R,R) isomer

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	ALS BEAMLINE 8.3.1
Synchrotron site	ALS
Beamline	8.3.1
Temperature [K]	100
Detector technology	PIXEL
Collection date	2021-11-11
Detector	DECTRIS PILATUS3 6M
Wavelength(s)	0.88572
Spacegroup name	P 43
Unit cell lengths	88.825, 88.825, 39.598
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	39.720 - 1.050
R-factor	0.1446
Rwork	0.143
R-free	0.16520
Structure solution method	MOLECULAR REPLACEMENT
Data reduction software	XDS (Jan 10, 2022)
Data scaling software	XSCALE
Phasing software	PHASER (2.8.3)
Refinement software	PHENIX (1.20.1_4487)

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	39.720	39.720	1.120
High resolution limit [Å]	1.050	3.150	1.050
Rmerge	0.082	0.052	1.499
Rmeas	0.090	0.056	1.638
Total number of observations	913217
Number of reflections	143100	5547	22811
<I/σ(I)>	8.15	27.94	0.76
Completeness [%]	99.8	99.9	98.9
Redundancy	6.382	6.167	6.25
CC(1/2)	0.998	0.998	0.586

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP	9.5	293	100 mM CHES, 28% PEG 3000