5SRH

PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with Z5265470867 - pyrimido-indole core only

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	ALS BEAMLINE 8.3.1
Synchrotron site	ALS
Beamline	8.3.1
Temperature [K]	100
Detector technology	PIXEL
Collection date	2021-11-11
Detector	DECTRIS PILATUS3 6M
Wavelength(s)	0.88557
Spacegroup name	P 43
Unit cell lengths	88.815, 88.815, 39.433
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	39.720 - 1.050
R-factor	0.1447
Rwork	0.144
R-free	0.16110
Structure solution method	MOLECULAR REPLACEMENT
Data reduction software	XDS (Jan 10, 2022)
Data scaling software	XSCALE
Phasing software	PHASER (2.8.3)
Refinement software	PHENIX (1.20.1_4487)

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	39.720	39.720	1.120
High resolution limit [Å]	1.050	3.150	1.050
Rmerge	0.059	0.040	0.761
Rmeas	0.065	0.043	0.832
Total number of observations	903838
Number of reflections	142160	5501	22685
<I/σ(I)>	12.11	35.95	1.65
Completeness [%]	99.8	99.6	98.9
Redundancy	6.358	6.224	6.226
CC(1/2)	0.999	0.998	0.868

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP	9.5	293	100 mM CHES, 28% PEG 3000