5SQP
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with Z5028367859 - (S) isomer
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.3.1 |
| Synchrotron site | ALS |
| Beamline | 8.3.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-10-15 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.88557 |
| Spacegroup name | P 43 |
| Unit cell lengths | 88.807, 88.807, 39.549 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.720 - 1.050 |
| R-factor | 0.1438 |
| Rwork | 0.143 |
| R-free | 0.15900 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Data reduction software | XDS (Jan 10, 2022) |
| Data scaling software | XSCALE |
| Phasing software | PHASER (2.8.3) |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 39.720 | 39.720 | 1.120 |
| High resolution limit [Å] | 1.050 | 3.150 | 1.050 |
| Rmerge | 0.057 | 0.040 | 0.671 |
| Rmeas | 0.062 | 0.043 | 0.733 |
| Total number of observations | 911401 | ||
| Number of reflections | 143031 | 5539 | 22873 |
| <I/σ(I)> | 12.45 | 34.69 | 1.79 |
| Completeness [%] | 99.8 | 99.8 | 99.3 |
| Redundancy | 6.372 | 6.251 | 6.22 |
| CC(1/2) | 0.999 | 0.998 | 0.896 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 293 | 100 mM CHES, 28% PEG 3000 |






