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5SPG

PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with Z4718398585

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-09-29
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.88557
Spacegroup nameP 43
Unit cell lengths88.758, 88.758, 39.534
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.110 - 1.050
R-factor0.1387
Rwork0.138
R-free0.15790
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS (Jan 10, 2022)
Data scaling softwareXSCALE
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]36.11036.1101.120
High resolution limit [Å]1.0503.1501.050
Rmerge0.0510.0340.706
Rmeas0.0550.0370.772
Total number of observations899930
Number of reflections142643552822858
<I/σ(I)>14.2943.871.87
Completeness [%]99.999.899.4
Redundancy6.3096.0956.24
CC(1/2)0.9990.9990.850
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9.5293100 mM CHES, 28% PEG 3000

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