5SPC

PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with Z5010894387 - (R,R) and (S,S) isomers

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	ALS BEAMLINE 8.3.1
Synchrotron site	ALS
Beamline	8.3.1
Temperature [K]	100
Detector technology	PIXEL
Collection date	2021-09-29
Detector	DECTRIS PILATUS3 6M
Wavelength(s)	0.88557
Spacegroup name	P 43
Unit cell lengths	88.872, 88.872, 39.565
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	44.440 - 1.050
R-factor	0.1355
Rwork	0.135
R-free	0.15330
Structure solution method	MOLECULAR REPLACEMENT
Data reduction software	XDS (Jan 10, 2022)
Data scaling software	XSCALE
Phasing software	PHASER (2.8.3)
Refinement software	PHENIX (1.20.1_4487)

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	44.440	44.440	1.120
High resolution limit [Å]	1.050	3.150	1.050
Rmerge	0.053	0.037	0.474
Rmeas	0.058	0.041	0.517
Total number of observations	920626
Number of reflections	142780	5543	22689
<I/σ(I)>	14.57	39.46	2.73
Completeness [%]	99.7	99.9	98.5
Redundancy	6.448	6.278	6.324
CC(1/2)	0.999	0.999	0.951

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, HANGING DROP	9.5	293	100 mM CHES, 28% PEG 3000