5SFU
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH c2(c(Nc1cncnc1)ccc(n2)C3CC3)C(Nc5c(C(N4CCCC4)=O)ccnc5)=O, micromolar IC50=0.018722
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-04-03 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.007500 |
Spacegroup name | H 3 |
Unit cell lengths | 135.029, 135.029, 234.652 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.550 - 2.400 |
R-factor | 0.1948 |
Rwork | 0.192 |
R-free | 0.25620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.009 |
RMSD bond angle | 1.596 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.550 | 43.550 | 2.460 |
High resolution limit [Å] | 2.400 | 10.730 | 2.400 |
Rmerge | 0.086 | 0.021 | 1.195 |
Rmeas | 0.099 | 0.024 | 1.388 |
Total number of observations | 242632 | ||
Number of reflections | 62287 | 681 | 4585 |
<I/σ(I)> | 13.57 | 57.3 | 1.17 |
Completeness [%] | 99.9 | 97.3 | 99.9 |
Redundancy | 3.895 | 3.749 | 3.869 |
CC(1/2) | 0.998 | 0.999 | 0.461 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 5-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2 |