5SFK
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH c1(nc(ccc1Nc2cncnc2)C3CC3)C(=O)Nc4nn(CC(F)(F)F)cc4, micromolar IC50=0.00639
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-08-29 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.979000 |
Spacegroup name | H 3 |
Unit cell lengths | 135.550, 135.550, 233.950 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.480 - 2.330 |
R-factor | 0.1876 |
Rwork | 0.184 |
R-free | 0.24840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.009 |
RMSD bond angle | 1.571 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.480 | 43.480 | 2.390 |
High resolution limit [Å] | 2.330 | 10.430 | 2.330 |
Rmerge | 0.078 | 0.021 | 1.016 |
Rmeas | 0.097 | 0.026 | 1.265 |
Total number of observations | 196258 | ||
Number of reflections | 67835 | 741 | 4864 |
<I/σ(I)> | 10.81 | 41.73 | 1.14 |
Completeness [%] | 99.3 | 96.7 | 95.9 |
Redundancy | 2.893 | 2.848 | 2.75 |
CC(1/2) | 0.997 | 0.998 | 0.379 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 5-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2 |