5SF9
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH c1ccc2c(c1)nc(c(n2)C)OCc3nc(cn3C)c4ccccc4, micromolar IC50=0.004192
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2010-12-20 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000000 |
Spacegroup name | H 3 |
Unit cell lengths | 135.640, 135.640, 235.889 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.780 - 2.370 |
R-factor | 0.1776 |
Rwork | 0.175 |
R-free | 0.22930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.008 |
RMSD bond angle | 1.503 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.780 | 43.780 | 2.430 |
High resolution limit [Å] | 2.370 | 10.600 | 2.370 |
Rmerge | 0.073 | 0.022 | 1.130 |
Rmeas | 0.081 | 0.025 | 1.254 |
Total number of observations | 343698 | ||
Number of reflections | 65665 | 731 | 4864 |
<I/σ(I)> | 14.81 | 52.69 | 1.4 |
Completeness [%] | 99.9 | 98.3 | 99.9 |
Redundancy | 5.234 | 4.717 | 5.352 |
CC(1/2) | 0.999 | 0.999 | 0.571 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 5-20 mg/mL protein in 25mM HEPES/NaOH pH7.5, 150mM NaCl, 50mM BME mixed 1:1 with reservoir 0.1M HEPES/NaOH pH7.5, 30% PEG550MME, 50mM MgCl2 |