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5SD6

Crystal Structure of Dihydrofolate Reductase from Homo sapiens bound to NADP and SDDC Inhibitor SDDC-892

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2016-07-15
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 43 21 2
Unit cell lengths74.190, 74.190, 143.210
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.144 - 2.150
R-factor0.1705
Rwork0.167
R-free0.20440
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.946
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (dev_2481)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0002.210
High resolution limit [Å]2.1509.6202.150
Rmerge0.0660.0200.597
Rmeas0.0700.0210.634
Total number of observations170145
Number of reflections220572771590
<I/σ(I)>22.1163.533.19
Completeness [%]98.088.299.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP289MCSG2 E5 (273901e5): 200mM Lithium sulfate, 100mM Sodium acetate:Acetic acid pH4.5, 20% (w/v) PEG8000; prot conc 26mg/mL, cryo 20% EG, puck ogi6-6

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