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5SC2

CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z190780124

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-07-14
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.91808
Spacegroup nameP 1 21 1
Unit cell lengths30.797, 82.063, 32.196
Unit cell angles90.00, 117.70, 90.00
Refinement procedure
Resolution28.510 - 1.208
R-factor0.1559
Rwork0.154
R-free0.18460
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2jcp
RMSD bond length0.010
RMSD bond angle1.110
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareREFMAC
Refinement softwareBUSTER (2.10.4 (20-APR-2021))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]28.50628.5061.303
High resolution limit [Å]1.2083.6961.208
Rmeas0.0580.0380.617
Rpim0.0310.0200.349
Total number of observations10448154084098
Number of reflections30235
<I/σ(I)>13.933.61.9
Completeness [%]75.897.723.8
Redundancy3.53.62.7
CC(1/2)0.9980.9970.714
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293200mM ammonium sulphate, 100mM MES, 24% PEG 5,000 MME

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PDB entries from 2024-05-15

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