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5SBN

CD44 PanDDA analysis group deposition -- The hyaluronan-binding domain of CD44 in complex with Z57040482

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-06
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.91199
Spacegroup nameP 1 21 1
Unit cell lengths30.782, 81.310, 31.914
Unit cell angles90.00, 117.78, 90.00
Refinement procedure
Resolution40.660 - 1.181
R-factor0.1674
Rwork0.166
R-free0.19500
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2jcp
RMSD bond length0.010
RMSD bond angle1.170
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareREFMAC
Refinement softwareBUSTER (2.10.4 (20-APR-2021))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.65540.6551.292
High resolution limit [Å]1.1813.5861.181
Rmeas0.1080.0800.514
Rpim0.0600.0440.356
Total number of observations9211150312700
Number of reflections31875
<I/σ(I)>6.914.71.6
Completeness [%]83.396.531.7
Redundancy2.93.21.7
CC(1/2)0.9960.9940.738
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293200mM ammonium sulphate, 100mM MES, 24% PEG 5,000 MME

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PDB entries from 2024-05-15

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