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5SAN

Endothiapepsin in complex with compound FU5-4

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-11
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9184
Spacegroup nameP 1 21 1
Unit cell lengths44.960, 72.610, 51.630
Unit cell angles90.00, 108.61, 90.00
Refinement procedure
Resolution48.930 - 0.940
R-factor0.1395
Rwork0.139
R-free0.14720
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.006
RMSD bond angle0.937
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.93048.9301.000
High resolution limit [Å]0.9402.8100.940
Rmerge0.0630.0431.315
Rmeas0.0740.0501.577
Total number of observations711675
Number of reflections198823758430116
<I/σ(I)>8.3930.240.7
Completeness [%]97.698.191.8
Redundancy3.5793.8013.099
CC(1/2)0.9970.9960.402
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.62900.1 M NaAc pH 4.6, 0.1 M NH4Ac pH 7.0, 27% (w/v) PEG 4000, 1.5µL protein + 1.5µL reservoir + 0.1µL seeds

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PDB entries from 2024-05-15

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