5S8T
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z198194396 synthetic derivative
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9159 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.398, 27.172, 55.994 |
Unit cell angles | 90.00, 100.20, 90.00 |
Refinement procedure
Resolution | 55.110 - 1.220 |
R-factor | 0.1788 |
Rwork | 0.177 |
R-free | 0.20490 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5rji |
RMSD bond length | 0.011 |
RMSD bond angle | 1.715 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 55.120 | 55.120 | 1.250 |
High resolution limit [Å] | 1.220 | 5.460 | 1.220 |
Rmerge | 0.028 | 0.017 | 0.244 |
Rmeas | 0.034 | 0.021 | 0.346 |
Rpim | 0.019 | 0.012 | 0.244 |
Total number of observations | 79801 | 1307 | 1014 |
Number of reflections | 31603 | ||
<I/σ(I)> | 15.2 | 43.4 | 1.1 |
Completeness [%] | 87.2 | 99.6 | 36 |
Redundancy | 2.5 | 2.9 | 1.1 |
CC(1/2) | 0.999 | 0.999 | 0.921 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 20% PEG 8000, 0.04M POTASSIUM PHOSPHATE |