5RV1
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000000251609
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.3.1 |
| Synchrotron site | ALS |
| Beamline | 8.3.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-07-17 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.88557 |
| Spacegroup name | P 43 |
| Unit cell lengths | 88.624, 88.624, 39.312 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.630 - 1.000 |
| R-factor | 0.1666 |
| Rwork | 0.166 |
| R-free | 0.17990 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Data reduction software | XDS (0.94) |
| Data scaling software | XSCALE |
| Phasing software | PHASER (2.8.3) |
| Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 39.630 | 39.630 | 1.060 |
| High resolution limit [Å] | 1.000 | 2.990 | 1.000 |
| Rmerge | 0.080 | 0.057 | 1.177 |
| Rmeas | 0.087 | 0.062 | 1.294 |
| Total number of observations | 1031673 | ||
| Number of reflections | 162969 | 6360 | 24933 |
| <I/σ(I)> | 8.17 | 24.99 | 0.84 |
| Completeness [%] | 99.0 | 99.9 | 94.2 |
| Redundancy | 6.33 | 6.254 | 5.812 |
| CC(1/2) | 0.998 | 0.998 | 0.752 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 293 | 100 mM CHES, 28% PEG 3000 |






