5RKO
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z30620520
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97622 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 82.010, 27.060, 55.650 |
Unit cell angles | 90.00, 100.27, 90.00 |
Refinement procedure
Resolution | 40.350 - 1.420 |
R-factor | 0.1935 |
Rwork | 0.192 |
R-free | 0.22350 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3mb3 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.830 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | REFMAC |
Refinement software | BUSTER (2.10.3 (29-NOV-2019)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.350 | 40.350 | 1.460 |
High resolution limit [Å] | 1.420 | 6.350 | 1.420 |
Rmerge | 0.051 | 0.023 | 0.943 |
Rmeas | 0.061 | 0.028 | 1.216 |
Rpim | 0.034 | 0.016 | 0.758 |
Total number of observations | 69161 | 818 | 3577 |
Number of reflections | 22801 | ||
<I/σ(I)> | 11.1 | 33.9 | 1 |
Completeness [%] | 98.9 | 97 | 96.8 |
Redundancy | 3 | 2.9 | 2.2 |
CC(1/2) | 0.998 | 0.999 | 0.553 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 20% PEG 8000, 0.04M potassium phosphate |