5RKN
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with Z373768900
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97622 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.620, 27.050, 55.850 |
Unit cell angles | 90.00, 100.35, 90.00 |
Refinement procedure
Resolution | 40.150 - 1.230 |
R-factor | 0.1954 |
Rwork | 0.194 |
R-free | 0.21670 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3mb3 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.810 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | REFMAC |
Refinement software | BUSTER (2.10.3 (29-NOV-2019)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.150 | 40.150 | 1.260 |
High resolution limit [Å] | 1.230 | 5.500 | 1.230 |
Rmerge | 0.031 | 0.022 | 0.445 |
Rmeas | 0.038 | 0.027 | 0.609 |
Rpim | 0.021 | 0.015 | 0.414 |
Total number of observations | 87522 | 1282 | 1836 |
Number of reflections | 32836 | ||
<I/σ(I)> | 14.3 | 42.7 | 1.1 |
Completeness [%] | 93.1 | 97.8 | 54.8 |
Redundancy | 2.7 | 3 | 1.3 |
CC(1/2) | 0.999 | 0.999 | 0.775 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 20% PEG 8000, 0.04M potassium phosphate |