5RJP
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with NCL-00024672
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97622 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.795, 27.202, 55.760 |
Unit cell angles | 90.00, 99.93, 90.00 |
Refinement procedure
Resolution | 30.100 - 1.242 |
R-factor | 0.1911 |
Rwork | 0.189 |
R-free | 0.22350 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3mb3 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.840 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | REFMAC |
Refinement software | BUSTER (2.10.3 (29-NOV-2019)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.100 | 30.100 | 1.310 |
High resolution limit [Å] | 1.240 | 3.930 | 1.240 |
Rmerge | 0.049 | 0.034 | 0.849 |
Rmeas | 0.060 | 0.040 | 1.168 |
Rpim | 0.033 | 0.022 | 0.797 |
Total number of observations | 80456 | 3680 | 2946 |
Number of reflections | 30622 | ||
<I/σ(I)> | 8.7 | 30.1 | 0.4 |
Completeness [%] | 88.9 | 99.4 | 49.3 |
Redundancy | 2.6 | 3.2 | 1.2 |
CC(1/2) | 0.998 | 0.998 | 0.492 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 20% PEG 8000, 0.04M potassium phosphate |