5RDS
PanDDA analysis group deposition -- Endothiapepsin ground state model 49
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.242, 72.963, 52.540 |
Unit cell angles | 90.00, 109.21, 90.00 |
Refinement procedure
Resolution | 42.760 - 0.970 |
R-factor | 0.1707 |
Rwork | 0.170 |
R-free | 0.17072 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.018 |
RMSD bond angle | 1.934 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.760 | 50.000 | 1.030 |
High resolution limit [Å] | 0.970 | 2.900 | 0.970 |
Rmerge | 0.052 | 0.052 | 0.199 |
Rmeas | 0.056 | 0.057 | 0.241 |
Total number of observations | 767725 | ||
Number of reflections | 150439 | 7185 | 13840 |
<I/σ(I)> | 18.46 | 27.34 | 7.75 |
Completeness [%] | 83.1 | 0.991 | 0.449 |
Redundancy | 4.724 | 6.82 | 1.37 |
CC(1/2) | 0.997 | 0.994 | 0.941 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |