5RDF
PanDDA analysis group deposition -- Endothiapepsin ground state model 37
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.186, 72.981, 52.489 |
Unit cell angles | 90.00, 109.12, 90.00 |
Refinement procedure
Resolution | 42.730 - 0.970 |
R-factor | 0.1685 |
Rwork | 0.168 |
R-free | 0.16847 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.018 |
RMSD bond angle | 1.980 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.730 | 50.000 | 1.030 |
High resolution limit [Å] | 0.970 | 2.900 | 0.970 |
Rmerge | 0.064 | 0.041 | 1.883 |
Rmeas | 0.069 | 0.045 | 2.089 |
Total number of observations | 1190631 | ||
Number of reflections | 169122 | 7153 | 21465 |
<I/σ(I)> | 12.92 | 45.3 | 0.67 |
Completeness [%] | 93.2 | 0.984 | 0.695 |
Redundancy | 6.678 | 6.64 | 3.72 |
CC(1/2) | 0.999 | 0.998 | 0.306 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |