5RCT
PanDDA analysis group deposition -- Endothiapepsin ground state model 15
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.261, 72.958, 52.570 |
Unit cell angles | 90.00, 109.35, 90.00 |
Refinement procedure
Resolution | 49.650 - 1.010 |
R-factor | 0.1672 |
Rwork | 0.167 |
R-free | 0.16718 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.017 |
RMSD bond angle | 1.913 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.650 | 50.000 | 1.070 |
High resolution limit [Å] | 1.010 | 3.020 | 1.010 |
Rmerge | 0.102 | 0.058 | 2.624 |
Rmeas | 0.110 | 0.062 | 2.852 |
Total number of observations | 1125093 | ||
Number of reflections | 153423 | 6405 | 23671 |
<I/σ(I)> | 8.28 | 31.84 | 0.57 |
Completeness [%] | 95.6 | 0.995 | 0.867 |
Redundancy | 6.958 | 7.08 | 5.63 |
CC(1/2) | 0.998 | 0.996 | 0.287 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |