5RCF
PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library H10b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.190, 73.182, 52.406 |
Unit cell angles | 90.00, 109.01, 90.00 |
Refinement procedure
Resolution | 42.760 - 1.000 |
R-factor | 0.1563 |
Rwork | 0.155 |
R-free | 0.15628 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.016 |
RMSD bond angle | 2.054 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.760 | 50.000 | 1.060 |
High resolution limit [Å] | 1.000 | 2.980 | 1.000 |
Rmerge | 0.060 | 0.037 | 1.416 |
Rmeas | 0.065 | 0.040 | 1.568 |
Total number of observations | 1125258 | ||
Number of reflections | 163872 | 6616 | 25744 |
<I/σ(I)> | 13 | 44.63 | 1.05 |
Completeness [%] | 98.3 | 0.988 | 0.907 |
Redundancy | 6.522 | 6.34 | 4.89 |
CC(1/2) | 0.999 | 0.998 | 0.496 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |