5RBS
PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library C08a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.229, 73.118, 52.356 |
Unit cell angles | 90.00, 109.10, 90.00 |
Refinement procedure
Resolution | 42.780 - 1.000 |
R-factor | 0.1613 |
Rwork | 0.161 |
R-free | 0.16134 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.017 |
RMSD bond angle | 1.962 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.780 | 50.000 | 1.060 |
High resolution limit [Å] | 1.000 | 2.980 | 1.000 |
Rmerge | 0.065 | 0.041 | 1.378 |
Rmeas | 0.071 | 0.045 | 1.526 |
Total number of observations | 1128952 | ||
Number of reflections | 163838 | 6544 | 26016 |
<I/σ(I)> | 12.55 | 42.67 | 0.91 |
Completeness [%] | 98.5 | 0.982 | 0.921 |
Redundancy | 6.544 | 6.41 | 4.95 |
CC(1/2) | 0.999 | 0.997 | 0.475 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |