5RBO
PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library A07a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.215, 73.139, 52.587 |
Unit cell angles | 90.00, 108.98, 90.00 |
Refinement procedure
Resolution | 42.790 - 1.080 |
R-factor | 0.2008 |
Rwork | 0.200 |
R-free | 0.20078 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.013 |
RMSD bond angle | 1.774 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.790 | 50.000 | 1.140 |
High resolution limit [Å] | 1.080 | 3.210 | 1.070 |
Rmerge | 0.111 | 0.059 | 1.828 |
Rmeas | 0.120 | 0.064 | 1.980 |
Total number of observations | 901669 | ||
Number of reflections | 128567 | 5257 | 20743 |
<I/σ(I)> | 8.21 | 28.93 | 0.99 |
Completeness [%] | 96.9 | 0.981 | 0.915 |
Redundancy | 6.618 | 5.98 | 6.08 |
CC(1/2) | 0.997 | 0.995 | 0.338 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |