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5R9H

PanDDA analysis group deposition Form1 MAP kinase p38-alpha -- Fragment TCJ658 in complex with MAP kinase p38-alpha

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2016-04-28
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths45.830, 85.590, 126.710
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.922 - 1.490
R-factor0.1935
Rwork0.193
R-free0.20110
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)6so1
Data reduction softwareXDS
Data scaling softwareAimless (0.5.23)
Phasing softwareREFMAC
Refinement softwarePHENIX (1.15.2_3472)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.92050.9201.530
High resolution limit [Å]1.4906.6601.490
Rmerge0.0460.0291.229
Rmeas0.0500.0321.332
Rpim0.0190.0130.509
Total number of observations542419667040485
Number of reflections82220
<I/σ(I)>17.452.51.6
Completeness [%]99.999.899.9
Redundancy6.66.36.7
CC(1/2)0.9990.9990.576
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.929127.5% PEG3350, 0.1 M Bis-Tris propane, pH 6.9, 50 mM ammonium sulfate, 0.2 M 1:1 magnesium chloride:magnesium sulfate, 10% glycerol

220113

PDB entries from 2024-05-22

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