5R8V
PanDDA analysis group deposition Form1 MAP kinase p38-alpha -- Fragment N09139b in complex with MAP kinase p38-alpha
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-02-13 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 45.871, 86.243, 127.662 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.337 - 1.479 |
| R-factor | 0.1805 |
| Rwork | 0.180 |
| R-free | 0.19510 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 6so1 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.17) |
| Phasing software | REFMAC |
| Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 29.340 | 29.340 | 1.520 |
| High resolution limit [Å] | 1.480 | 6.620 | 1.480 |
| Rmerge | 0.042 | 0.022 | 0.741 |
| Rmeas | 0.046 | 0.024 | 0.824 |
| Rpim | 0.018 | 0.009 | 0.354 |
| Total number of observations | 542428 | 6376 | 31488 |
| Number of reflections | 84846 | ||
| <I/σ(I)> | 22.2 | 67.3 | 2 |
| Completeness [%] | 99.4 | 97.7 | 97.3 |
| Redundancy | 6.4 | 6 | 5.2 |
| CC(1/2) | 1.000 | 0.999 | 0.722 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.9 | 291 | 27.5% PEG3350, 0.1 M Bis-Tris propane, pH 6.9, 50 mM ammonium sulfate, 0.2 M 1:1 magnesium chloride:magnesium sulfate, 10% glycerol |






