5R4J
PanDDA analysis group deposition -- CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF in complex with FMOPL000280a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 112.040, 27.430, 38.240 |
Unit cell angles | 90.00, 96.06, 90.00 |
Refinement procedure
Resolution | 55.770 - 1.390 |
R-factor | 0.2028 |
Rwork | 0.201 |
R-free | 0.24090 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3uv2 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.378 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.31) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.970 | 29.970 | 1.430 |
High resolution limit [Å] | 1.390 | 6.220 | 1.390 |
Rmerge | 0.050 | 0.025 | 0.824 |
Rmeas | 0.061 | 0.030 | 1.024 |
Rpim | 0.033 | 0.016 | 0.599 |
Total number of observations | 72919 | 908 | 4392 |
Number of reflections | 22942 | ||
<I/σ(I)> | 13.2 | 43.2 | 1.2 |
Completeness [%] | 97.0 | 97.3 | 94.7 |
Redundancy | 3.2 | 3.1 | 2.7 |
CC(1/2) | 0.999 | 0.999 | 0.465 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 30% PEG4000, 0.1M Tris pH 8.5, 0.2M MgCl2 |