5R3G
PanDDA analysis group deposition -- Auto-refined data of Endothiapepsin for ground state model 40, DMSO-Free
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.360, 73.018, 52.808 |
Unit cell angles | 90.00, 109.18, 90.00 |
Refinement procedure
Resolution | 39.550 - 1.106 |
R-factor | 0.1401 |
Rwork | 0.137 |
R-free | 0.14840 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.550 | 50.000 | 1.170 |
High resolution limit [Å] | 1.110 | 3.310 | 1.110 |
Rmerge | 0.075 | 1.818 | |
Rmeas | 0.081 | 1.972 | |
Number of reflections | 128552 | 4913 | 20246 |
<I/σ(I)> | 8.59 | 25.15 | 0.93 |
Completeness [%] | 99.4 | 0.995 | 0.969 |
Redundancy | 6.74 | 6.37 | |
CC(1/2) | 0.994 | 0.384 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG4000 |