5R2V
PanDDA analysis group deposition -- Auto-refined data of Endothiapepsin for ground state model 19, DMSO-Free
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.202, 73.014, 52.400 |
Unit cell angles | 90.00, 109.20, 90.00 |
Refinement procedure
Resolution | 42.688 - 1.048 |
R-factor | 0.1427 |
Rwork | 0.141 |
R-free | 0.15220 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.688 | 50.000 | 1.110 |
High resolution limit [Å] | 1.050 | 3.140 | 1.050 |
Rmerge | 0.026 | 2.191 | |
Rmeas | 0.029 | 2.379 | |
Number of reflections | 149669 | 5725 | 23654 |
<I/σ(I)> | 12.43 | 62.37 | 0.74 |
Completeness [%] | 99.5 | 0.995 | 0.976 |
Redundancy | 6.91 | 6.47 | |
CC(1/2) | 0.999 | 0.379 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG4000 |