5R25
PanDDA analysis group deposition -- Endothiapepsin in complex with fragment F2X-Entry F08, DMSO-free
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.210, 72.990, 52.569 |
Unit cell angles | 90.00, 109.32, 90.00 |
Refinement procedure
Resolution | 29.397 - 1.078 |
R-factor | 0.1159 |
Rwork | 0.116 |
R-free | 0.12470 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.397 | 50.000 | 1.140 |
High resolution limit [Å] | 1.080 | 3.230 | 1.080 |
Rmerge | 0.052 | 0.036 | 0.570 |
Rmeas | 0.057 | 0.039 | 0.618 |
Total number of observations | 943320 | ||
Number of reflections | 137805 | 5229 | 21936 |
<I/σ(I)> | 15.96 | 48.91 | 2.78 |
Completeness [%] | 99.6 | 0.991 | 0.983 |
Redundancy | 6.845 | 6.75 | 6.53 |
CC(1/2) | 0.999 | 0.998 | 0.881 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG4000 |