5R1M
PanDDA analysis group deposition -- Auto-refined data of Aar2/RNaseH for ground state model 37, DMSO-free
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-29 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.827 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 87.716, 82.440, 92.145 |
Unit cell angles | 90.00, 107.55, 90.00 |
Refinement procedure
Resolution | 21.880 - 1.900 |
R-factor | 0.2515 |
Rwork | 0.249 |
R-free | 0.29940 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 21.880 | 50.000 | 2.010 |
High resolution limit [Å] | 1.900 | 5.650 | 1.900 |
Rmerge | 0.059 | 0.032 | 2.001 |
Rmeas | 0.064 | 0.035 | 2.170 |
Total number of observations | 337733 | ||
Number of reflections | 49386 | 1942 | 7869 |
<I/σ(I)> | 15.8 | 58.13 | 0.84 |
Completeness [%] | 99.6 | 0.994 | 0.983 |
Redundancy | 6.832 | 7.24 | 6.6 |
CC(1/2) | 0.999 | 0.999 | 0.347 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |