Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5QYN

PanDDA analysis group deposition -- Auto-refined data of Aar2/RNaseH for ground state model 03

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX IV BEAMLINE BioMAX
Synchrotron siteMAX IV
BeamlineBioMAX
Temperature [K]100
Detector technologyPIXEL
Collection date2019-06-22
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.827
Spacegroup nameC 1 2 1
Unit cell lengths88.689, 81.735, 93.056
Unit cell angles90.00, 108.20, 90.00
Refinement procedure
Resolution44.660 - 1.650
R-factor0.2183
Rwork0.216
R-free0.21826
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.009
RMSD bond angle1.474
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareREFMAC (5.8.0238)
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]44.66050.0001.750
High resolution limit [Å]1.6504.9301.650
Rmerge0.0850.0523.040
Rmeas0.0920.0573.287
Total number of observations508812
Number of reflections69771291311147
<I/σ(I)>9.3130.20.6
Completeness [%]97.00.990.917
Redundancy6.9236.666.32
CC(1/2)0.9980.9970.295
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.529319% (w/v) Peg 4000, 3% (v/v) DMSO, 0.1M Tris-HCl pH 8.5, 0.2M Li2SO4

240291

PDB entries from 2025-08-13

PDB statisticsPDBj update infoContact PDBjnumon