5QY2
PanDDA analysis group deposition -- Aar2/RNaseH in complex with fragment F2X-Entry A12b
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-22 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 88.522, 82.031, 93.961 |
Unit cell angles | 90.00, 108.83, 90.00 |
Refinement procedure
Resolution | 43.770 - 1.360 |
R-factor | 0.2179 |
Rwork | 0.217 |
R-free | 0.21790 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.012 |
RMSD bond angle | 1.712 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.770 | 50.000 | 1.690 |
High resolution limit [Å] | 1.360 | 4.750 | 1.590 |
Rmerge | 0.079 | 0.045 | 2.681 |
Rmeas | 0.086 | 0.049 | 2.902 |
Total number of observations | 560086 | ||
Number of reflections | 127211 | 3307 | 12547 |
<I/σ(I)> | 9.99 | 33.95 | 0.55 |
Completeness [%] | 97.5 | 0.995 | 0.913 |
Redundancy | 6.711 | 6.73 | 6.19 |
CC(1/2) | 0.998 | 0.998 | 0.355 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 19% (w/v) Peg 4000, 3% (v/v) DMSO, 0.1M Tris-HCl pH 8.5, 0.2M Li2SO4 |