5QXY
PanDDA analysis group deposition -- Crystal Structure of ATAD2 in complex with JKH93A
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-04-26 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92819 |
| Spacegroup name | P 65 2 2 |
| Unit cell lengths | 80.966, 80.966, 140.151 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 28.060 - 1.540 |
| R-factor | 0.1631 |
| Rwork | 0.163 |
| R-free | 0.17240 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 3dai |
| RMSD bond length | 0.015 |
| RMSD bond angle | 1.962 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.23) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 28.040 | 28.040 | 1.580 |
| High resolution limit [Å] | 1.540 | 6.910 | 1.540 |
| Rmerge | 0.064 | 0.024 | 0.810 |
| Rmeas | 0.066 | 0.024 | 0.832 |
| Rpim | 0.015 | 0.006 | 0.189 |
| Total number of observations | 775970 | 9441 | 53235 |
| Number of reflections | 40499 | ||
| <I/σ(I)> | 31.8 | 103.9 | 3.9 |
| Completeness [%] | 99.8 | 98.6 | 97.3 |
| Redundancy | 19.2 | 17 | 18.6 |
| CC(1/2) | 1.000 | 1.000 | 0.917 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 277 | 1.6M Ammonium Sulfate, 0.1M bis-tris pH 5.5 |
