5QXT
PanDDA analysis group deposition -- Crystal Structure of ATAD2 in complex with JKH47
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-04-23 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92819 |
| Spacegroup name | P 65 2 2 |
| Unit cell lengths | 80.196, 80.196, 139.066 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 27.810 - 1.550 |
| R-factor | 0.1658 |
| Rwork | 0.165 |
| R-free | 0.17620 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 3dai |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.928 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.23) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 27.810 | 27.810 | 1.590 |
| High resolution limit [Å] | 1.550 | 6.920 | 1.550 |
| Rmerge | 0.066 | 0.029 | 0.747 |
| Rmeas | 0.068 | 0.030 | 0.767 |
| Rpim | 0.016 | 0.007 | 0.173 |
| Total number of observations | 756821 | 9328 | 53206 |
| Number of reflections | 39242 | ||
| <I/σ(I)> | 29.4 | 86.6 | 4.3 |
| Completeness [%] | 99.9 | 98.6 | 98.3 |
| Redundancy | 19.3 | 17.2 | 19.2 |
| CC(1/2) | 1.000 | 1.000 | 0.912 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 277 | 1.6M Ammonium Sulfate, 0.1M bis-tris pH 5.5 |
