5QU3
Crystal Structure of domain swapped human Nck SH3.1, 1.01A, monoclinic
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-17 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 29.453, 55.723, 39.924 |
Unit cell angles | 90.00, 98.70, 90.00 |
Refinement procedure
Resolution | 32.230 - 1.020 |
R-factor | 0.1645 |
Rwork | 0.163 |
R-free | 0.18880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
RMSD bond length | 0.013 |
RMSD bond angle | 1.636 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0222) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.230 | 32.230 | 1.050 |
High resolution limit [Å] | 1.020 | 4.560 | 1.020 |
Rmerge | 0.049 | 0.027 | 3.718 |
Rmeas | 0.054 | 0.030 | 4.264 |
Total number of observations | 288226 | ||
Number of reflections | 59526 | 750 | 3513 |
<I/σ(I)> | 9.88 | 37.3 | 0.29 |
Completeness [%] | 91.8 | 98.2 | 73.4 |
Redundancy | 4.84 | 5.315 | 4.047 |
CC(1/2) | 0.999 | 0.998 | 0.181 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 0.1 M Tris/HCl pH 8.0, 0.15 M NaCl, 8% PEG 8000 |