5QPZ
PanDDA analysis group deposition -- Crystal Structure of T. cruzi FPPS in complex with FMOPL000524a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-08 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.91587 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 57.845, 57.845, 394.627 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 65.770 - 1.620 |
R-factor | 0.2023 |
Rwork | 0.200 |
R-free | 0.24440 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 1yhk |
RMSD bond length | 0.021 |
RMSD bond angle | 2.024 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 131.530 | 131.530 | 1.660 |
High resolution limit [Å] | 1.620 | 7.240 | 1.620 |
Rmerge | 0.117 | 0.041 | 2.724 |
Rmeas | 0.120 | 0.043 | 2.821 |
Rpim | 0.028 | 0.011 | 0.728 |
Total number of observations | 916632 | 10986 | 55319 |
Number of reflections | 51803 | ||
<I/σ(I)> | 14 | 46.3 | 1.2 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 17.7 | 14.2 | 14.9 |
CC(1/2) | 0.999 | 0.999 | 0.522 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 80 mM MES, 4 mM ZnSO4, 12.36% w/v PEG MME 550, 11.57% v/v glycerol |