5QNF
Group deposition of library data - Crystal Structure of EcDsbA after initial refinement with no ligand modelled (structure H9_1)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-04-18 |
| Detector | ADSC QUANTUM 210r |
| Wavelength(s) | 0.95370 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 117.652, 64.381, 74.404 |
| Unit cell angles | 90.00, 125.79, 90.00 |
Refinement procedure
| Resolution | 34.740 - 1.960 |
| R-factor | 0.2323 |
| Rwork | 0.231 |
| R-free | 0.28790 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.435 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.720 | 47.720 | 2.010 |
| High resolution limit [Å] | 1.960 | 8.980 | 1.960 |
| Rmerge | 0.048 | 0.017 | 0.725 |
| Rmeas | 0.055 | 0.019 | 0.830 |
| Rpim | 0.026 | 0.010 | 0.400 |
| Total number of observations | 133909 | 1281 | 9059 |
| Number of reflections | 31835 | 343 | 2166 |
| <I/σ(I)> | 13.9 | 43.9 | 1.5 |
| Completeness [%] | 98.1 | 95.3 | 95.5 |
| Redundancy | 4.2 | 3.7 | 4.2 |
| CC(1/2) | 0.999 | 0.999 | 0.830 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | 11-13% PEG 8000 5-7.5% GLYCEROL 1 MM CUCL2 100 MM SODIUM CACODYLATE |
