5QM2
Group deposition of library data - Crystal Structure of EcDsbA after initial refinement with no ligand modelled (structure D9_1)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2018-04-18 |
| Detector | ADSC QUANTUM 210r |
| Wavelength(s) | 0.95370 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 116.709, 65.188, 73.549 |
| Unit cell angles | 90.00, 125.62, 90.00 |
Refinement procedure
| Resolution | 47.439 - 1.919 |
| R-factor | 0.2222 |
| Rwork | 0.221 |
| R-free | 0.27240 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.257 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.440 | 47.440 | 1.960 |
| High resolution limit [Å] | 1.920 | 8.990 | 1.920 |
| Rmerge | 0.044 | 0.023 | 0.678 |
| Rmeas | 0.050 | 0.026 | 0.780 |
| Rpim | 0.024 | 0.013 | 0.382 |
| Total number of observations | 142227 | 1280 | 9281 |
| Number of reflections | 34389 | 349 | 2281 |
| <I/σ(I)> | 13.2 | 35.5 | 1.5 |
| Completeness [%] | 99.6 | 97 | 98.3 |
| Redundancy | 4.1 | 3.7 | 4.1 |
| CC(1/2) | 0.999 | 0.999 | 0.795 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 293 | 11-13% PEG 8000 5-7.5% GLYCEROL 1 MM CUCL2 100 MM SODIUM CACODYLATE |
